池袋・津川・浅野 研究室　論文
||最新-2021年|| ||2020-2016年|| ||2015年-2011年|| ||2010年-2006年|| ||2005年-2001年|| ||2000年-1996年|| ||1995年-1986年||

2010年

  1. Application of the Fc fusion format to generate tag-free bi-specific diabodies
    Ryutaro Asano, Keiko Ikoma, Hiroko Kawaguchi, Yuna Ishiyama, Takeshi Nakanishi, Mitsuo Umetsu, Hiroki Hayashi, Yu Katayose, Michiaki Unno, Toshio Kudo and Izumi Kumagai
    The FEBS Journal (2010) 277 (2), 477-487

  2. Glycosylation pattern of humanized IgG-like bispecific antibody produced by recombinant CHO cells
    Wook-Dong Kim, Miwako Tokunaga, Hiroyuki Ozaki, Takuya Ishibashi, Kohsuke Honda, Hiroyuki Kajiura, Kazuhito Fujiyama, Ryutaro Asano, Izumi Kumagai, Takeshi Omasa and Hisao Ohtake
    Applied Microbiology and Biotechnology (2010) 85 (3), 535-542

  3. Selection of DNA Aptamer against Prostate Specific Antigen using a Genetic Algorithm and Application to Sensing
    Nasa Savory, Koichi Abe, Koji Sode and Kazunori Ikebukuro
    Biosensors and Bioelectronics (2010) 26 (4), 1386-1391

  4. Constructing an Improved Pyrroloquinoline Quinone Glucose Dehydrogenase Binding Aptamer for Enzyme Labeling
    Koichi Abe, Koji Sode and Kazunori Ikebukuro
    Biotechnology Letters (2010) 32 (9), 1293-1298

  5. Engineering of Dye-mediated Dehydrogenase Property of Fructosyl Amino Acid Oxidases by Site-directed Mutagenesis Studies of its Putative Proton Relay System
    Seungsu Kim, Eri Nibe, Stefano Ferri, Wakako Tsugawa and Koji Sode
    Biotechnology Letters (2010) 32 (8), 1123-1129

  6. Wireless Monitoring of Blood Glucose Levels in Flatfish with a Needle Biosensor
    Hideaki Endo, Eiji Takahashi, Masataka Murata, Hitoshi Ohnuki, Huifeng Ren, Wakako Tsugawa and Koji Sode
    Fisheries Science (2010) 76 (4), 687-694

  7. Protein-protein interactions and selection: generation of molecule-binding proteins on the basis of tertiary structural information
    Mitsuo Umetsu, Takeshi Nakanishi, Ryutaro Asano, Takamitsu Hattori and Izumi Kumagai
    The FEBS Journal (2010) 277 (9), 2009-2014

  8. Target cell-restricted apoptosis induction by 528scFv-TRAIL fusion protein specific for human EGFR and expressed in Escherichia coli
    Adel Bardan, Ryutaro Asano, Makoto Nakayama, Yasuhiro Watanabe, Takeshi Nakanishi, Mitsuo Umetsu, Hiroki Hayashi, Yu Katayose, Michiaki Unno and Izumi Kumagai
    International Journal of Oncology (2010) 36 (5), 1229-1234

  9. Motif-based Search for a Novel Fructosyl Peptide Oxidase from Genome Databases
    Seungsu Kim, Stefano Ferri, Wakako Tsugawa, Kazushige Mori and Koji Sode
    Biotechnology and Bioengineering (2010) 106 (3), 358-366

  10. Functional Expression of Phanerochaete chrysosporium Cellobiose Dehydrogenase Flavin Domain
    Desriani, Stefano Ferri and Koji Sode
    Biotechnology Letters (2010) 32 (6), 855-859

  11. Screening of DNA aptamer which binds to alpha-synuclein
    Kaori Tsukakoshi, Ryuichi Harada, Koji Sode and Kazunori Ikebukuro
    Biotechnology Letters (2010) 32 (5), 643-648

  12. The inhibitory effect of pyrroloquinoline quinone on the amyloid formation and cytotoxicity of truncated alpha-synuclein
    Jihoon Kim, Ryuichi Harada, Masaki Kobayashi, Natsuki Kobayashi and Koji Sode
    Molecular Neurodegeneration (2010) 5 (20)

  13. Enzyme Fuel Cell for Cellulolytic Sugar Conversion Employing FAD Glucose Dehydrogenase and Carbon Cloth Electrode Based on Direct Electron Transfer Principle
    Desriani, Takuya Hanashi, Tomohiko Yamazaki, Wakako Tsugawa and Koji Sode
    The Open Electrochemistry Journal (2010) 2 (6)-10

  14. Amino Acid Substitution at the Substrate-binding Subsite Alters the Specificity of the Phanerochaete chrysosporium cellobiose Dehydrogenase
    Desriani, Stefano Ferri and Koji Sode
    Biochemical and Biophysical Research Communication (2010) 391 (2), 1246-1250

  15. Screening and Improvement of an Anti-VEGF DNA Aptamer
    Yoshihiko Nonaka, Koji Sode and Kazunori Ikebukuro
    Molecules (2010) 15 (1), 215-225

  16. Pyrroloquinoline Quinone Inhibits the Fibrillation of Amyloid Proteins
    Jihoon Kim, Masaki Kobayashi, Makoto Fukuda, Daisuke Ogasawara, Natsuki Kobayashi, Sungwoong Han, Chikashi Nakamura, Masaki Inada, Chisato Miyaura, Kazunori Ikebukuro and Koji Sode
    Prion (2010) 4 (1), 26-31

  17. Integration of PEGylation and refolding for renaturation of recombinant proteins from insoluble aggregates produced in bacteria - Application to a single-chain Fv fragment
    Izumi Kumagai, Ryutaro Asano, Takeshi Nakanishi, Kentaro Hashikami, Sho Tanaka, Adel Badran, Hideaki Sanada and Mitsuo Umetsu
    Journal of Bioscience and Bioengineering (2010) 109 (5), 447-452

  18. Highly Enhanced Cytotoxicity of a Dimeric Bispecific Diabody, the hEx3 Tetrabody
    Ryutaro Asano, Keiko Ikoma, Yukiko Sone, Hiroko Kawaguchi, Shintaro Taki, Hiroki Hayashi, Takashi Nakanishi, Mitsuo Umetsu, Yu Katayose, Michiaki Unno, Toshio Kudo and Izumi Kumagai
    Journal of Biological Chemistry (2010) 285 (27), 20844-20849

2009年

  1. Selection of DNA aptamers against insulin and construction of an aptameric enzyme subunit for insulin sensing
    Wataru Yoshida, Eriko Mochizuki, Madoka Takase, Hijiri Hasegawa, Yo Morita, Hiroki Yamazaki, Koji Sode and Kazunori Ikebukuro
    Biosensors and Bioelectronics (2009) 24 (5), 1116-1120

  2. BioCapacitor-A novel category of biosensor
    Takuya Hanashi†, Tomohiko Yamazaki†, Wakako Tsugawa, Stefano Ferri, Daisuke Nakayama, Masamitsu Tomiyama, Kazunori Ikebukuro and Koji Sode
    Biosensors and Bioelectronics (2009) 24 (7), 1837-1842 †: Contributed equally

  3. Detection system based on the conformational change in an aptamer and its application to simple bound/free separation
    Daisuke Ogasawara, Naomi S. Hachiya, Kiyotoshi Kaneko, Koji Sode and Kazunori Ikebukuro
    Biosensors and Bioelectronics (2009) 24 (5), 1372-1376

  4. An Aptamer-Based Bound/Free Separation System for Protein Detection
    Mieko Fukasawa, Wataru Yoshida, Hiroki Yamazaki, Koji Sode and Kazunori Ikebukuro
    Electroanalysis (2009) 21 (11), 1297-1302

  5. The effect of amino acid substitution in the imperfect repeat sequences of alpha-synuclein on fibrillation
    Ryuichi Harada, Natsuki Kobayashi, Jihoon Kim, Chikashi Nakamura, Sung-Woong Han, Kazunori Ikebukuro and Koji Sode
    Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease (2009) 1792 (10), 998-1003

  6. Kinetic Mechanism and Inhibitor Characterization of WNK1 Kinase
    Yukiko I. Yagi, Koichi Abe, Kazunori Ikebukuro and Koji Sode
    Biochemistry (2009) 48 (43), 10255-10266

  7. Zn finger-based direct detection system for PCR products of Salmonella spp. and the Influenza A virus
    Yuko Osawa, Kazunori Ikebukuro and Koji Sode
    Biotechnology Letters (2009) 31 (5), 725-733

  8. DNA Aptamers that Bind to PQQGDH as an Electrochemical Labeling Tool
    Yuko Osawa, Madoka Takase, Koji Sode and Kazunori Ikeukuro
    Electroanalysis (2009) 21 (11), 1303-1308

  9. Wireless enzyme sensor system for real-time monitoring of blood glucose levels in fish
    Hideaki Endo, Yuki Yonemori, Kyoko Hibi, Huifeng Ren, Tetsuhito Hayashi, Wakako Tsugawa and Koji Sode
    Biosensors and Bioelectronics (2009) 24 (5), 1417-1423

  10. Review:
    Review of Fructosyl Amino Acid Oxidase Engineering Research: A Glimpse into the Future of Hemoglobin A1c Biosensing
    Stefano Ferri, Seungsu Kim, Wakako Tsugawa and Koji Sode
    Journal of Diabetes Science and Technology (2009) 3 (3), 585-592

  11. The construction of a glucose-sensing luciferase
    Atsushi Taneoka, Akane Sakaguchi-Mikami, Tomohiko Yamazaki, Wakako Tsugawa and Koji Sode
    Biosensors and Bioelectronics (2009) 25 (1), 76-81

  12. Cumulative effect of amino acid substitution for the development of fructosyl valine-specific fructosyl amine oxidase
    Seungsu Kim, Seiji Miura, Stefano Ferri, Wakako Tsugawa and Koji Sode
    Enzyme and Microbial Technology (2009) 44 (1), 52-56

  13. Electrochemical Detection of Epidermal Growth Factor Receptors on a Single Living Cell Surface by Scanning Electrochemical Microscopy
    Yasufumi Takahashi, Takeshi Miyamoto, Hitoshi Shiku, Ryutaro Asano, Tomoyuki Yasukawa, Izumi Kumagai and Tomokazu Matsue
    Analytical Chemistry (2009). 81 (7), 2785-2790

2008年

  1. Improvement of Aptamer Affinity by Dimerization
    Hijiri Hasegawa†, Ken-ichi Taira†, Koji Sode and Kazunori Ikebukuro
    Sensors (2008) 8 (2), 1090-1098 †: Contributed equally


  2. Selection of DNA aptamers against VEGF165 using a protein competitor and the aptamer blotting method
    Hijiri Hasegawa, Koji Sode and Kazunori Ikebukuro
    Biotechnology Letters (2008) 30 (5), 829-834

  3. Label-free homogeneous detection of immunoglobulin E by an aptameric enzyme subunit
    Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Biotechnology Letters (2008) 30 (3), 421-425

  4. The simple and rapid detection of specific PCR products from bacterial genomes using Zn finger proteins
    Yuko Osawa, Kazunori Ikebukuro, Hiroaki Motoki, Takafumi Matsuo, Michio Horiuchi and Koji Sode
    Nucleic Acids Research (2008) 36 (11), e68

  5. Aptameric enzyme subunit for homogeneous DNA sensing
    Kazunori Ikebukuro, Wataru Yoshida and Koji Sode
    Biotechnology Letters (2008) 30 (2), 243-252

  6. Zinc finger protein-based detection system of PCR products for pathogen diagnosis
    Yuko Osawa, Hiroaki Motoki, Takafumi Matsuo, Michio Horiuchi, Koji Sode and Kazunori Ikebukuro
    Nucleic Acids Symposium Series (2008) 52 (1), 23-24

  7. Aggregation and Fibrillation Study of alpha-synuclein Under Applied Voltage
    Yuko Osawa, Kazunori Ikebukuro, Natsuki Kobayashi, Sung Woong Han, Chikashi Nakamura and Koji Sode
    Electrochemistry (2008) 76 (8), 614-618

  8. Development of fructosyl amine oxidase specific to fructosyl valine by site-directed mutagenesis
    Seiji Miura, Stefano Ferri, Wakako Tsugawa, Seungsu Kim and Koji Sode
    Protein Engineering, Design and Selection (2008) 21 (4), 233-239

  9. Wireless Biosensor System for Real-Time Cholesterol Monitoring in Fish
    Yohei Yoneyama, Yuki Yonemori, Koji Sode, Wakako Tsugawa, Tetsuhito Hayashi, Huifeng Ren and Hideaki Endo
    ECS Meeting Abstracts (2008) 2, 2834

  10. Needle Biosensor for Continuous Blood Glucose Monitoring in Flatfish
    Eiji Takahashi, Koji Sode, Wakako Tsugawa, Huifeng Ren, Tetsuhito Hayashi and Hideaki Endo
    ECS Meeting Abstracts (2008) 2, 1470

  11. Direct Electron Transfer Type Continuous Glucose Monitoring System with Miniaturized Electrode
    Hitomi Shimizu, Wakako Tsugawa, Hideaki Endo and Koji Sode
    ECS Meeting Abstracts (2008) 2, 1505

  12. Propionate Sensor Using Coenzyme-A Transferase and Acyl-CoA Oxidase
    Sode Koji, Tsugawa Wakako, Aoyagi Minoru, Rajashekhara Eranna and Watanabe Kazuya
    Protein and Peptide Letters (2008) 15 (8), 779-781

  13. Thermodynamic Consequences of Mutations in Vernier Zone Residues of a Humanized Anti-human Epidermal Growth Factor Receptor Murine Antibody, 528
    Koki Makabe, Takeshi Nakanishi, Kouhei Tsumoto, Yoshikazu Tanaka, Hidemasa Kondo, Mitsuo Umetsu, Yukiko Sone, Ryutaro Asano and Izumi Kumagai
    The Journal of Biological Chemistry (2008) 283 (2), 1156-1166

  14. Diabody-based Recombinant Formats of Humanized IgG-like Bispecific Antibody With Effective Retargeting of Lymphocytes to Tumor Cells
    Asano Ryutaro, Kawaguchi Hiroko, Watanabe Yasuhiro, Nakanishi Takeshi, Umetsu Mitsuo, Hayashi Hiroki, Katayose Yu, Unno Michiaki, Kudo Toshio and Kumagai Izumi
    Journal of Immunotherapy (2008) 31 (8), 752-761

  15. Preferential heterodimerization of a bispecific diabody based on a humanized anti-EGFR antibody 528
    Ryutaro Asano, Yukiko Sone, Keiko Ikoma, Hiroki Hayashi, Takeshi Nakanishi, Mitsuo Umetsu, Yu Katayose, Michiaki Unno, Toshio Kudo and Izumi Kumagai
    Protein Engineering, Design and Selection (2008) 21 (10), 596-603

  16. Grafting of material-binding function into antibodies: Functionalization by peptide grafting
    Takamitsu Hattori, Mitsuo Umetsu, Takeshi Nakanishi, Kouhei Tsumoto, Satoshi Ohara, Hiroya Abe, Makio Naito, Ryutaro Asano, Tadafumi Adschiri and Izumi Kumagai
    Biochemical and Biophysical Research Communications (2008) 365 (4), 751-757

  17. Characterize Cell Function using Scanning Electrochemical Optical Microscopy with Tip-Sample Distance Regulation
    Yasufumi Takahashi, Takeshi Miyamoto, Tatsuya Murata, Hitoshi Shiku, Ryutaro Asano, Tomoyuki Yasukawa, Izumi Kumagai and Tomokazu Matsue
    ECS Meeting Abstracts (2008) 2, 1490

2007年

  1. Peptide ligand screening of α-synuclein aggregation modulators by In silico panning
    Koichi Abe, Natsuki Kobayashi, Koji Sode and Kazunori Ikebukuro
    BMC Bioinformatics (2007) 8, 451

  2. In silico panning for a non-competitive peptide inhibitor
    Yukiko Yagi, Kotaro Terada, Takahisa Noma, Kazunori Ikebukuro and Koji Sode
    BMC Bioinformatics (2007) 8, 11

  3. Screening of DNA Aptamer Against Mouse Prion Protein by Competitive Selection
    Daisuke Ogasawara, Hijiri Hasegawa, Kiyotoshi Kaneko, Koji Sode and Kazunori Ikebukuro
    Prion (2007) 1 (4), 248-254

  4. Stopped-flow system with ozonizer for the estimation of low biochemical oxygen demand in environmental samples
    Gab-Joo Chee, Yoko Nomura, Kazunori Ikebukuro and Isao Karube
    Biosensors and Bioelectronics (2007) 22 (12), 3092-3098

  5. Selection and characterization of DNA aptamers against VEGF165 with aptamer blotting method and its application
    Kazunori Ikebukuro, Hijiri Hasegawa and Koji Sode
    Nucleic Acids Symposium Series (2007) 51 (1), 399-400

  6. Aptameric enzyme subunit for homogeneous protein sensing
    Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Nucleic Acids Symposium Series (2007) 51 (1), 99-100

  7. Selection of DNA aptamers that inhibit enzymatic activity of PQQGDH and its application
    Kazunori Ikebukuro, Madoka Takase and Koji Sode
    Nucleic Acids Symposium Series (2007) 51 (1), 403-404

  8. Specific detection of PCR product from Legionella pneumophila strainPhiladelphia1 using zinc finger protein Sp2
    Kazunori Ikebukuro, Takenori Kumagai, Hiroaki Motoki, Yuko Osawa, Takafumi Matuo, Michio Horiuchi and Koji Sode
    Nucleic Acids Symposium Series (2007) 51 (1), 285-286

  9. Construction of target molecule sensing system using aptameric enzyme subunit based on PQQGDH activity
    Kazunori Ikebukuro, Yo Morita, Wataru Yoshida and Koji Sode
    Nucleic Acids Symposium Series (2007) 51 (1), 401-402

  10. A novel wireless glucose sensor employing direct electron transfer principle based enzyme fuel cell
    Noriko Kakehi, Tomohiko Yamazaki, Wakako Tsugawa and Koji Sode
    Biosensors and Bioelectronics (2007) 22 (9-10), 2250-2255

  11. Novel fluorescent sensing system for alpha-fructosyl amino acids based on engineered fructosyl amino acid binding protein
    Akane Sakaguchi, Stefano Ferri, Wakako Tsugawa and Koji Sode
    Biosensors and Bioelectronics (2007) 22 (9-10), 1993-1938

  12. High IL-21 receptor expression and apoptosis induction by IL-21 in follicular lymphoma
    Norihiko Akamatsu, Yasuaki Yamada, Hiroo Hasegawa, Koki Makabe, Ryutaro Asano, Izumi Kumagai, Ken Murata, Yoshitaka Imaizumi, Kunihiro Tsukasaki, Kazuto Tsuruda, Kazuyuki Sugahara, Sunao Atogami, Katsunori Yanagihara and Shimeru Kamihira
    Cancer Letters (2007) 256 (2), 196-206

  13. Highly Effective Recombinant Format of a Humanized IgG-like Bispecific Antibody for Cancer Immunotherapy with Retargeting of Lymphocytes to Tumor Cells
    Ryutaro Asano, Yasuhiro Watanabe, Hiroko Kawaguchi, Hidesuke Fukazawa, Takeshi Nakanishi, Mitsuo Umetsu, Hiroki Hayashi, Yu Katayose, Michiaki Unno, Toshio Kudo and Izumi Kumagai
    The Journal of Biological Chemistry (2007) 282 (38), 27659-27665

  14. Electrochemical screening of recombinant protein solubility in Escherichia coli using scanning electrochemical microscopy (SECM)
    Kuniaki Nagamine, Shiho Onodera, Ai Kurihara, Tomoyuki Yasukawa, Hitoshi Shiku, Ryutaro Asano, Izumi Kumagai and Tomokazu Matsue
    Biotechnology and Bioengineering (2007) 96 (5), 1008-1013

2006年

  1. Pyrroloquinoline quinone (PQQ) prevents fibril formation of alpha-synuclein
    Masaki Kobayashi, Jihoon Kim, Natsuki Kobayashi, Sungwoong Han, Chikashi Nakamura, Kazunori Ikebukuro and Koji Sode
    Biochemical and Biophysical Research Communications (2006) 349 (3), 1139-1144

  2. Aptameric Enzyme Subunit for Biosensing Based on Enzymatic Activity Measurement
    Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Analytical Chemistry (2006) 78 (10), 3296-3303

  3. Homogeneous DNA sensing using enzyme-inhibiting DNA aptamers
    Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Biochemical and Biophysical Research Communications (2006) 348 (1), 245-252

  4. Aptamer selection based on inhibitory activity using an evolution-mimicking algorithm
    Takahisa Noma and Kazunori Ikebukuro
    Biochemical and Biophysical Research Communications (2006) 347 (1), 226-231

  5. A screening method for DNA aptamers that bind to a specific, unidentified protein in tissue samples
    Takahisa Noma, Kazunori Ikebukuro, Koji Sode, Takuya Ohkubo, Yuji Sakasegawa and Naomi Hachiya
    Biotechnology Letters (2006) 28 (17), 1377-1381

  6. Analysis of the evolution of the thrombin-inhibiting DNA aptamers using a genetic algorithm
    Kazunori Ikebukuro, Wataru Yoshida, Takahisa Noma and Koji Sode
    Biotechnology Letters (2006) 28 (23), 1933-1937

  7. Characterization and application of aptamers for Taq DNA polymerase selected using an evolution-mimicking algorithm
    Takahisa Noma, Koji Sode and Kazunori Ikebukuro
    Biotechnology Letters (2006) 28 (23), 1939-1944

  8. Analysis of DNA and Zinc finger interactions using mechanical force spectroscopy
    Yanyan Wang, Shin-ichiro Oyokawa, Sung Woong Han, Wei Huang, Kazunori Ikebukuro, Chikashi Nakamura and Jun Miyake
    NanoBiotechnology (2006) 2 (3-4), 87-93

  9. Active site analysis of fructosyl amine oxidase using homology modeling and site-directed mutagenesis
    Seiji Miura, Stefano Ferri, Wakako Tsugawa, Seungsu Kim and Koji Sode
    Biotechnology Letters (2006) 28 (23), 1895-1900

  10. Humanization of the Bispecific Epidermal Growth Factor Receptor × CD3 Diabody and Its Efficacy as a Potential Clinical Reagent
    Ryutaro Asano, Yukiko Sone, Koki Makabe, Kouhei Tsumoto, Hiroki Hayashi, Yu Katayose, Michiaki Unno, Toshio Kudo and Izumi Kumagai
    Clinical Cancer Research (2006) 12 (13), 4036-4042


||最新-2021年|| ||2020-2016年|| ||2015年-2011年|| ||2010年-2006年|| ||2005年-2001年|| ||2000年-1996年|| ||1995年-1986年||
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