01.
“Construction of engineered fructosyl peptidyl oxidase for enzyme sensor applications
under normal atmospheric conditions”
,
Seungsu Kim Eri Nibe, Wakako Tsugawa, Katsuhiro Kojima, Stefano Ferri, Koji Sode,
Biotechnology Letters, 2012 Mar;34(3):491-7. Epub 2011 Nov 4
02.
“BioRadioTransmitter: A Self-Powered Wireless Glucose-Sensing System”
,
Takuya Hanashi, Tomohiko Yamazaki, Wakako Tsugawa, Kazunori Ikebukuro and Koji Sode,
Journal of Diabetes Science and Technology, 5(5), 1030-1035 (2011)
03.
“Review of Glucose Oxidases and Glucose Dehydrogenases: A Bird’s Eye View of Glucose Sensing Enzymes”
,
Stefano Ferri, Katsuhiro Kojima, and Koji Sode,
Journal of Diabetes Science and Technology, 5(5),1068- 1076 (2011)
04.
“Development of a Novel Biosensing System Based on the Structural Change of a Polymerized Guanine-quadruplex DNA Nanostructure”
,
Yo Morita, Wataru Yoshida, Nasa Savory, Sung Woong Han, Masayuki Tera, Kazuo Nagasawa, Chikashi Nakamura, Koji Sode and Kazunori Ikebukuro,
Biosens Bioelectron. 2011 Aug 15;26(12):4837-41.
05.
“Screening of Aspergillus-derived FAD: -glucose dehydrogenases from fungal genome database”
,
Kazushige Mori, Mitsuharu Nakajima, Katsuhiro Kojima, Kodai Murakami, Stefano Ferri and Koji Sode,
Biotechnol Lett. 2011 Jul 12. [Epub ahead of print]
PMID: 21748361 [PubMed - as supplied by publisher]
06.
“Construction of a novel glucose-sensing molecule based on a substrate-binding protein for intracellular sensing”
,
Akane Sakaguchi-Mikami, Akiyoshi Taniguchi, Koji Sode and Tomohiko Yamazaki,
Biotechnol Bioeng. 2011 Apr;108(4):725-33. doi: 10.1002/bit.23006. Epub 2010 Dec 4.
PMID: 21404246 [PubMed - indexed for MEDLINE]
07.
“Aptameric Sensors Based on Structural Change for Diagnosis”
,
Koichi Abe, Daisuke Ogasawara, Wataru Yoshida, Koji Sode amd Kazunori Ikebukuro,
Faraday Discuss. 149:93-105 (2011)
01.
"Selection of DNA Aptamer against Prostate Specific Antigen using a Genetic Algorithm and Application to Sensing”
,
Nasa Savory, Koichi Abe, Koji Sode and Kazunori Ikebukuro,
Biosens. Bioelectron., 26(4):1386-91 (2010)
02.
"Constructing an Improved Pyrroloquinoline Quinone Glucose Dehydrogenase Binding Aptamer for Enzyme Labeling”
,Koichi Abe, Koji Sode and Kazunori Ikebukuro,
Biotechnol Lett. 32(9):1293-8(2010)
03.
"Engineering of Dye-mediated Dehydrogenase Property of Fructosyl Amino Acid Oxidases by Site-directed Mutagenesis Studies of its Putative Proton Relay System”
,
Seungsu Kim, Eri Nibe, Stefano Ferri, Wakako Tsugawa and Koji Sode,
Biotechnol Lett. 32(8):1123-9(2010)
04.
"Wireless Monitoring of Blood Glucose Levels in Flatfish with a Needle Biosensor”
,
Hideaki Endo, Eiji Takahashi, Masataka Murata, Hitoshi Ohnuki, Huifeng Ren, Wakako Tsugawa, Koji Sode,
Fisheries Science (Chemistry and Biochemistry), 76, 687-694 (2010)
05.
"Motif-based Search for a Novel Fructosyl Peptide Oxidase from Genome Databases”
,
Seungsu Kim, Stefano Ferri, Wakako Tsugawa, Kazushige Mori and Koji Sode,
Biotechnol Bioeng. 15;106(3):358-66(2010)
06.
"Functional Expression of Phanerochaete chrysosporium Cellobiose Dehydrogenase Flavin Domain"
,
Desriani, Stefano Ferri nad Koji Sode,
Biotechnology Lett., 32, 855-859 (2010)
07.
“Screening of DNA Aptamer Which Binds to α-Ssynuclein”
,
Kaori Tsukakoshi, Ryuichi Harada, Koji Sode and Kazunori Ikebukuro,
Biotechnology Lett., 32(5):643-648 (2010 )
08.
“The inhibitory effect of pyrroloquinoline quinone on the amyloid formation and cytotoxicity of truncated alpha-synuclein”
,
Jihoon Kim, Ryuichi Harada, Masaki Kobayashi, Natsuki Kobayashi and Koji Sode,
Mol Neurodegener. 20;5:20(2010)
09.
“Enzyme Fuel Cell for Cellulolytic Sugar Conversion Employing FAD Glucose Dehydrogenase and Carbon Cloth Electrode Based on Direct Electron Transfer Principle”
,
Desriani, Takuya Hanashi, Tomohiko Yamazaki, Wakako Tsugawa and Koji Sode,
The Open Electrochemistry Journal, 2, 6-10(2010)
10.
“Amino Acid Substitution at the Substrate-binding Subsite Alters the Specificity of the Phanerochaete chrysosporium cellobiose Dehydrogenase”
,
Desriani, Stefano Ferri and Koji Sode,
Biochem.Biophys.Res.Commun., 8;391(2):1246-50(2010)
11.
“Screening and Improvement of an Anti-VEGF DNA Aptamer”
,
Yoshihiko Nonaka, Koji Sode and Kazunori Ikebukuro,
Biochem.Biophys.Res.Commun., 8;391(2):1246-50(2010)
12.
“Pyrroloquinoline Quinone Inhibits the Fibrillation of Amyloid Proteins”
,
Jihoon Kim, Masaki Kobayashi, Makoto Fukuda, Daisuke Ogasawara, Natsuki Kobayashi, Sungwoong Han, Chikashi Nakamura, Masaki Inada, Chisato Miyaura, Kazunori Ikebukuro and Koji Sode,
Prion 4(1):26-31 (2010 )
01.
“Cloning and characterization of fructosamine-6-kinase from Arthrobacter aurescens”
,
Akane Sakaguchi-Mikami, Miho Kameya, Stefano Ferri, Wakako Tsugawa and Koji Sode,
Appl. Biochem. Biotechnol., 2013 Apr 23, [Epub ahead of print]
02.
"Engineering of a green-light inducible gene expression system in Synechocystis sp. PCC6803."
,
Abe K, Miyake K, Nakamura M, Kojima K, Ferri S, Ikebukuro K, Sode K.
Microb Biotechnol. 2014 Mar;7(2):177-83. doi: 10.1111/1751-7915.12098. Epub 2013 Dec 12.
PMID: 24330635 [PubMed - in process]
03.
"Screening of peptide ligands for pyrroloquinoline quinone glucose dehydrogenase using antagonistic template-based biopanning."
,
Abe K, Yoshida W, Terada K, Yagi-Ishii Y, Ferri S, Ikebukuro K, Sode K.
Int J Mol Sci. 2013 Nov 25;14(12):23244-56. doi: 10.3390/ijms141223244.
04.
“Cloning and characterization of fructosamine-6-kinase from Arthrobacter aurescens”
,
Akane Sakaguchi-Mikami, Miho Kameya, Stefano Ferri, Wakako Tsugawa and Koji Sode,
Appl. Biochem. Biotechnol., 2013 Apr 23, [Epub ahead of print]
05.
“Identification and functional analysis of fructosyl amino acid binding protein
from Gram-positive bacterium Arthrobacter sp.”
,
Akane Sakaguchi-Mikami, Stefano Ferri, Satoshi Katayama, Wakako Tsugawa and Koji Sode,
J. Applied Microbiology, 2013 Jan. 30, [Epub ahead of print]
06.
“Partial Peptide of α-Synuclein Modified with Small-Molecule Inhibitors Specifically Inhibits
Amyloid Fibrillation of α-Synuclein”
,
Wataru Yoshida, Natsuki Kobayashi, Yasuhiko Sasaki, Kazunori Ikebukuro and Koji Sode,
Int. J. Molecular Science, 14(2), 2590-2600 (2013)
07.
“Engineering Fructosyl Peptide Oxidase to Improve Activity Toward the Fructosyl Hexapeptide Standard
for HbA1c Measurement”
,
Stefano Ferri, Yusuke Miyamoto, Akane Sakaguchi-Mikami, Wakako Tsugawa and Koji Sode,
Molecular Biotechnology, 2013 Jan 20. [Epub ahead of print]
01.
“Rapid cytotoxicity screening platform for amyloid inhibitors using a membrane-potential
sensitive fluorescent probe”
,
Jihoon Kim, Yasuhiko Sasaki, Wataru Yoshida, Natsuki Kobayashi, Anthony J. Veloso, Kagan Kerman,
Kazunori Ikebukuro and Koji Sode,
Anal.Chem. (Dec.10; Epub ahead of print)
02.
“Direct Electron Transfer Type Disposable Sensor Strip for Glucose Sensing Employing
an Engineered FAD Glucose Dehydrogenase”
,
Yuki Yamashita, Stefano Ferri, Mai Linh Huynh, Hitomi Shimizu, Hideaki Yamaoka, Koji Sode,
Enzyme.Microbiol.Biotechnol. (Epub 2012 Nov 16)
03.
“Mutational analysis of the oxygen-binding site of cholesterol oxidase and its impact
on dye-mediated dehydrogenase activity”
,
Katsuhiro Kojima, Tomohiko Kobayashi, Wakako Tsugawa, Stefano Ferri, and Koji Sode,
J.Molecular Catalysis B; Enzymatic, article available on line, 88, 41-46 (2013)
04.
“Construction of mutant glucose oxidases with increased dye-mediated dehydrogenase activity”
,
Yohei Horaguchi, Shoko Saito, Katsuhiro Kojima, Wakako Tsugawa, Stefano Ferri and Koji Sode,
Int. J. Molecular Science, 13(11):14149-57 (2012)
05.
“Substrate specificity engineering of Escherichia coli derived fructosamine 6-kinase”
,
Akane Sakaguchi- Mikami, Miho Kameya, Yusuke Miyamoto, Stefano Ferri, Wakako Tsugawa,
Katsuhiro Kojima, Koji Sode,
Biotechnol.Lett. (Oct 18; Epub ahead of print)
06.
“Biomolecular Engineering of Biosensing Molecules -The Challenges in Creating Sensing Molecules
for Glycated Protein Biosensing -”
,
Stefano Ferri and Koji Sode, Electrochemistry, 80(5), 293–298 (2012)
07.
“Nitrous Oxide Sensing using Oxygen-Insensitive Direct-Electron-Transfer-Type Nitrous Oxide Reductase”
,
Wakako TSUGAWA, Hitomi SHIMIZU, Masahiro Tatara, Yoshiyuki Ueno, Katsuhiro Kojima, Koji Sode,
Electrochemistry, 80(5), 371–374 (2012)
08.
“BioLC-Oscillator: A Self-Powered Wireless Glucose-Sensing System
with the Glucose Dependent Resonance Frequency”
,
Takuya Hanashi, Tomohiko Yamazaki, Wakako Tsugawa, Kazunori Ikebukuro, and Koji Sode,
Electrochemistry, 80(5), 367–370 (2012)
09.
“Electrochemical SNP Detection Using Glucose Dehydrogenase”
,
Koichi Abe, Chiharu Kiyohara, Yoko Ssaito, Koji Sode, and Kazunori Ikebukuro,
Electrochemistry, 80(5), 345–347 (2012)
10.
“Glucose Monitoring by Direct Electron Transfer Needle-Type Miniaturized Electrode”
,
Hitomi Shimizu and Wakako Tsugawa,
Electrochemistry, 80(5), 375–378 (2012)
11.
“Sensitive Electrochemical ATP Assay Combined with Enzymatic ATP Amplification Reaction”
,
Daisuke Okamura, Kunihiko Machida, Takeshi Kawahara, Katsuhiro Kojima, Wakako Tsugawa,
Electrochemistry, 80(5), 334-336 (2012)
