Tokyo University of Agriculture and Technology Yoshino Lab.

PUBLICATIONSArticles

2025
  1. Tomoki Yamanaka, Takashi Yabuuchi, Yoshiaki Maeda, Tomoko Yoshino, Kosuke Kataoka, Tsuyoshi Tanaka "Establishment of a nitrate-reductase promoter-driven inducible expression system for metabolic engineering in the marine diatom Fistulifera solaris"Journal of Bioscience and Bioengineering, (2025)
  2. Tsuyoshi Tanaka, Kaoruko Akasaka, Rein Yasui, Naoto Shinohara, Tomoko Yoshino, Daisuke Nojima, Makoto Mochizuki, Takatoshi Ohata, Fumitaka Kamachi, Tsuneji Sawai "Electroosmotic Flow-Based Nanoinjection Technique Using a Nanopipette for Green Microalgae" Mar. Biotechnol. 27, 108 (2025).
  3. Satoshi Murata, Natusno Kushiyama, Yusuke Yabu, Kahori Watanabe, Taiga Fujii, Rein Yasui, Daisuke Nojima, Yoshiaki Maeda, Tomoko Yoshino, Yusuke Matsuda, Tsuyoshi Tanaka Establishment of genome editing techniques in the marine oleaginous diatom Fistulifera solaris for improved oil accumulationJournal of Bioscience and BioengineeringVolume 140, Issue 5, November 2025, Pages 271-276
  4. Tomoko Yoshino, Tomohiro Takabayashi, Qian Bao, Tsuyoshi Tanaka, Ryo Negishi, Tatsu Shimoyama, Takeshi Sawada, Yusuke Kanemasa, Fumiaki Koizumi Rapid Recovery and Short-Term Culture of Gastric Circulating Tumor Cells Using Microcavity Array Engineering in Life Sciences, June, 2025
  5. Ryoto Tomoe, Toru Honda, Tsuyoshi Tanaka, Tomoko Yoshino "HLA-DM co-expression enhances MHC class II function in the magnetosome display system" Microbiology Spectrum , October, 2025
  6. Ryoto Tomoe, Shunya Waki, Keita Morimoto, Takaho Ogaki, Tsuyoshi Tanaka, Tomoko Yoshino "Orthogonal in vivo and in vitro membrane engineering enables human-like lipid remodeling of bacterial magnetosomes for functional TrkA display" Applied and Environmental Microbiology, November, 2025
2024
  1. Tsuyoshi Tanaka, Seiichiro Moriya, Tomomi Nonoyama, Yoshiaki Maeda, Marshila Kaha, Tomoko Yoshino, Mitsufumi Matsumoto, Chris Bowler "Lipid droplets-vacuoles interaction promotes lipophagy in the oleaginous diatom Fistulifera solaris" Algal Research., 79 (2024)
  2. Hikaru Tago, Yoshiaki Maeda, Yusuke Tanaka, Hiroya Kohketsu, Tae-Kyu Lim, Manabu Harada, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "Line image sensor-based colony fingerprinting system for rapid pathogenic bacteria identification" Biosens. Bioelectron., 249 (2024)
  3. Noraiza Suhaimi, Ryota Kumakubo, Tomoko Yoshino, Yoshiaki Maeda, Satoshi Murata, Tsuyoshi Tanaka "Expansion of omega-3 polyunsaturated fatty acid metabolism of the oleaginous diatom Fistulifera solaris by genetic engineering"J. Biosci. Bioeng., 138(2) (2024)
  4. Haruka Uno, Hiyori Takeuchi, Ishin Abe, Tomoko Yoshino, Tomoyuki Taguchi, Yuko Hirakawa, Tadashi Matsunaga, Tsuyoshi Tanaka "PCR- and wash-free detection of serum miRNA via signaling probe hybridization" Biotechnol. Bioeng., (2024)
  5. Hiroaki Takeda, Yuki Matsuzawa, Manami Takeuchi, Mikiko Takahashi, Kozo Nishida, Takeshi Harayama, Yoshimasa Todoroki, Kuniyoshi Shimizu, Nami Sakamoto, Takaki Oka, Masashi Maekawa, Mi Hwa Chung, Yuto Kurizaki, Saki Kiuchi, Kanako Tokiyoshi, Bujinlkham Buyantogtokh, Misaki Kurata, Aleš Kvasnička, Ushio Takeda, Haruki Uchino, Mayu Hasegawa, Junki Miyamoto, Kana Tanabe, Shigenori Takeda, Tetsuya Mori, Ryota Kumakubo, Tsuyoshi Tanaka, Tomoko Yoshino, Mami Okamoto, Hidenori Takahashi, Makoto Arita & Hiroshi Tsugawa “MS-DIAL 5 multimodal mass spectrometry data mining unveils lipidome complexities” Nat. Commun., 15(1) (2024)
2023
  1. Ryoto Tomoe, Kazushi Fujimoto, Tsuyoshi Tanaka, Atsushi Arakaki, David Kisailus, Tomoko Yoshino "Lipid Membrane Modulated Control of Magnetic Nanoparticles within Bacterial Systems."J. Biosci. Bioeng., 136(3), 253-260 (2023)
  2. Marshila Kaha, Masayoshi Noda, Yoshiaki Maeda, Yumika Kaneko, Tomoko Yoshino, Tsuyoshi Tanaka "Characterization of oil body-associated proteins obtained from oil bodies with different sizes in oleaginous diatom Fistulifera solaris."J. Biosci. Bioeng., 135, 359-368 (2023)
2022
  1. Katsutoshi Hori, Shogo Yoshimoto, Tomoko Yoshino, Tamotsu Zako, Gen Hirano, Satoshi Fujita, Chikashi Nakamura, Ayana Yamagishi, Noriho Kamiya "Recent advances in reserch on biointerfaces: From cell surfaces to artificial interfaces" J. Biosci. Bioeng., 133, 195-207 (2022)
  2. Noraiza Suhaimi, Yoshiaki Maeda, Tomoko Yoshino, Tsuyoshi Tanaka, "Effects of fatty aci synthase-inhibitors on polyunsaturated fatty acid production in marine diatom Fistulifera solaris JPCC DA0580."J.Biosci.Bioeng., 133, 340-346 (2022)
  3. Ryo Negishi, Hitomi Yamakawa, Takeru Kobayashi, Mayuko Horikawa, Tatsu Shimoyama, Fumiaki Koizumi, Takeshi Sawada, Keisuke Oboki, Yasushi Omuro, Chikako Funasaka, Akihiko Kageyama, Yusuke Kanemasa, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino, "Transcriptomic profiling of single circulating tumor cells provides insght into human metastatic gastric cancer" Commun. Biol., 5 (20) (2022)
  4. Tomoko Yoshino, Yihao Mao, Yoshiaki Maeda, Ryo Negishi, Satoshi Murata, Seiichiro Moriya, Hirofumi Shimada, Atsushi Arakaki, Kenichi Kobayashi, Yoshitsugu Hagiwara, Kazutoshi Okamoto, Tsuyoshi Tanaka, "Single-cell genotyping of phytoplankton from ocean water by gel-based cell manipulation." Biotechnol. J., e2100633. (2022)
  5. Yoshiaki Maeda, Ryosuke Kobayashi, Kahori Watanabe, Tomoko Yoshino, Chirs Bowler, Mitsufumi Matsumoto, Tsuyoshi Tanaka, "Chromosome-Scale Genome Assembly of the Marine Oleaginous Diatom Fistulifera solaris. " Mar. Biotechnol., 24, 788-800 (2022)
  6. Devis Montroni, Takeru Kobayashi, Taige Hao, Derek Lublin, Tomoko Yoshino, David Kisailus, "Direct Ink Write Printing of Chitin-Based Gel Fibers with Customizable Fibril Alignment, Porosity, and Mechanical Properties for Biomedical Applications. " J. Funct. Biomater., 13 (2), 83 (2022)
2021
  1. Yuichiro Kashiyama, Yuki Ishizuka, Issei Terauchi, Toshiki Matsuda, Yoshiaki Maeda, Tomoko Yoshino, Mitsufumi Matsumoto, Akinori Yabuki, Chris Bowler, Tsuyoshi Tanaka "Engineered chlorophyll catabolism conferring predator resistance for microalgal biomass production"Metab. Eng., 66, 79-86, (2021)
  2. Yoshiaki Maeda, Yuki Tsuru, Nana Matsumoto, Tomomi Nonoyama, Tomoko Yoshino, Mitsufumi Matsumoto, Tsuyoshi Tanaka "Prostaglandin production by the microalgal with hetelogous expression of cyclooxgenase"Biotechnol. Bioeng., 1-10, (2021)
  3. Tsuyoshi Tanaka, Yoshiaki Maeda, Noraiza Suhaimi, Chiharu Tsuneoka, Tomomi Nonoyama, Tomoko Yoshino, Naohiro Kato,Kyle J. Lauersen "Intron-mediated enhancement of transgene expression in the oleaginous diatom Fistulifera soraris towards bisabolence production" Agal Res., 57 (2021)
  4. Tomoko Yoshino, Sayaka Tamaya, Yoshiaki Maeda, Kazushi Fujimoto, Shuhei Ota, SyunyaWaki, David Kisailus, Tsuyoshi Tanaka, "Magnetosome membrane engineering to improve G protein-coupled receptor activities in the magnetosome display system"Metab. Eng., 67, 125-132, (2021)
  5. Tomoyuki Taguchi, Machi Ishikawa, Takashi Tademura, Yuko Hirakawa, Tomoko Yoshino, Yoshiaki Maeda, Hiyori Takeuchi, Daisuke Nojima, Takeo Tanaami, Tadashi Matsunaga, Tsuyoshi Tanaka, "Amplification-free detection of bacterial genes using a signaling probe-based DNA microarray"Biosens. Bioelectron., 194, 113659, (2021)
  6. Yoshiaki Maeda, Tomoko Yoshino, Atsushi Kogiso, Ryo Negishi, Tomohiro Takabayashi, Hikaru Tago, Taekyu Lim, Manabu Harada, Tadashi Matsunaga, Tsuyoshi Tanaka, "Lensless imaging-based discrimination between tumor cells and blood cells towards circulating tumor cell cultivation"Analyst, (2021)
  7. Haruka Uno, Hiyori Takeuchi, Tomoko Yoshino, Takashi Tadenuma, Yuko Hirakawa,Yoshiaki Maeda, Tomoyuki Taguchi, Tadashi Matsunaga, Tsuyoshi Tanaka, "Signaling probe design for amplification-free detection of bacterial genes using DNA microarry"J. Biosci. Bioeng., (2021)
2020
  1. Dianursanti, Arisyah Siregar, Yoshiaki Maeda, Tomoko Yoshino, Tsuyoshi Tanaka, "The Effects of Solvents and Solid-to-Solvent Rations on Ultrasound-Assisted Extracition of Carotenoids from Chlorella vulgaris"I J tech., (2020)
  2. Ryo Negishi, Hyuga Saito, Reito Iwata, Tsuyoshi Tanaka, Tomoko Yoshino “Performance Evaluation of a High‐Throughput Separation System for Circulating Tumor Cells Based on Microcavity Array”Eng. Life Sci., 20, 485-493, (2020)
  3. Anna Pohl, Steven A. Herrera, David Restrepo, Ryo Negishi, Jae-Young Jung, Chris Salinas, Richard Wuhrer, Tomoko Yoshino, Joanna McKittrick, Atsushi Arakaki, Michiko Nemoto, Pablo Zavattieri, David Kisailus "Radular Stylus of Cryptochiton Stelleri: A Multifunctional Lightweight and Flexible Fiber-Reinforced Composite”J. Mech. Behav. Biomed. Mater., 111, 103991, (2020)
  4. Tsuyoshi Aketo, Rina Hashizume, Yusuke Yabu, Yumiko Hoshikawa, Daisuke Nojima, Yoshiaki Maeda, Tomoko Yoshino, Hiroyuki Takano, Tsuyoshi Tanaka "Characterization of a Novel Marine Unicellular Alga, Pseudoneochloris sp. Strain NKY372003 as a High Carbohydrate Producer"J. Biosci. Bioeng., 6 (129), 687-692 (2020)
  5. Tsuyoshi Aketo, Yumiko Hoshikawa, Daisuke Nojima, Yusuke Yabu, Yoshiaki Maeda, Tomoko Yoshino, Hiroyuki Takano, Tsuyoshi Tanaka "Selection and characterization of Microalgae with Potential for Nutrient Removal from Municipal Wastewater and Simultaneous Lipid Production"J. Biosci. Bioeng., 5 (129), 565-572 (2020)
  6. Atsushi Arakaki, Takuya Matsumoto, Nobumitsu Shimura, Yoshiaki Maeda, Tomoko Yoshino, Mitsufumi Matsumoto, David Kisailus, Tsuyoshi Tanaka "Analysis of UV Irradiation-Induced Cell Settling of an Oleaginous Diatom, Fistulifera Solaris, for Efficient Biomass Recovery"Algal. Res. 47, 101834 (2020)
2019
  1. Yuichiro Kashiyama, Akiko Yokoyama, Takashi Shiratori, Sebastian Hess, Fabrice Not, Charles Bachy, Andres Gutiérrez-Rodríguez, Mengyun Wang, Man Chen, Yingchun Gong, Kensuke Seto, Maiko Kagami, Yoko Hamamoto, Daisuke Honda, Takahiro Umetani, Akira Shihongi, Motoki Kayama, Toshiki Matsuda, Junya Taira, Akinori Yabuki, Masashi Tsuchiya, Yoshihisa Hirakawa, Akane Kawaguchi, Mami Nomura, Atsushi Nakamura, Noriaki Namba, Mitsufumi Matsumoto, Tsuyoshi Tanaka, Tomoko Yoshino, Rina Higuchi, Akihiro Yamamoto, Tadanobu Maruyama, Aika Yamaguchi, Akihiro Uzuka, Shin-ya Miyagisima, Jun Kawahara, Toshinobu Suzaki, Masami Nakazawa, Takahiro Ishikawa, Moe Maruyama, Goro Tanifuji, Masanobu Kawachi, Yusuke Kinoshita, Hitoshi Tamiaki "Taming Chlorophylls by Early Eukaryotes Underpinned Algal Interactions and the Diversification of the Eukaryotes on the Oxygenated Earth" ISME J., 13, 1899-1910 (2019)
  2. Tomomi Nonoyama, Daisuke Nojima, Yoshiaki Maeda, Masayoshi Noda, Tomoko Yoshino, Mitsufumi Matsumoto, Chris Bowler, Tsuyoshi Tanaka "Proteomics Analysis of Lipid Droplets Indicates Involvement of Membrane Trafficking Proteins in Lipid Droplet Breakdown in the Oleaginous Diatom Fistulifera solaris" Algal Res., 44, 101660 (2019)
  3. Yoshiaki Maeda, Yui Sugiyama, Tae-Kyu Lim, Manabu Harada, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "Rapid Discrimination of Fungal Species by the Colony Fingerprinting"Biosens. Bioelectron., 146, 111747 (2019)
2018
  1. Tatsuhiro Nomaguchi, Yoshiaki Maeda, Yue Liang, Tomoko Yoshino, Toru Asahi, Tsuyoshi Tanaka "Comprehensive Analysis of Triacylglycerol Lipases in the Oleaginous Diatom Fistulifera solaris JPCC DA0580 with Transcriptomics under Lipid Degradation" J. Biosci. Bioeng., 126, 258-265 (2018)
  2. Tomoko Yoshino, Takumi Shimada, Yasuhito Ito, Toru Honda, Yoshiaki Maeda, Tadashi Matsunaga, Tsuyoshi Tanaka "Biosynthesis of Thermoresponsive Magnetic Nanoparticles by Magnetosome Display System" Bioconjugate Chem., 29, 1756-1762 (2018)
  3. Tatsuhiro Nomaguchi, Yoshiaki Maeda, Tomoko Yoshino, Toru Asahi, Leila Tirichine, Chris Bowler, Tsuyoshi Tanaka "Homoeolog Expression Bias in Allopolyploid Oleaginous Marine Diatom Fistulifera solaris" BMC Genomics, 19, 330 (2018)
  4. Ryo Negishi, Kaori Takai, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "High-throughput manipulation of circulating tumor cells using a multiple single-cell encapsulation system with a digital micromirror device" Anal. Chem., 90, 16 (2018)
  5. Yoshiaki Maeda, Yui Sugiyama, Atsushi Kogiso, Tae-Kyu Lim, Manabu Harada, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "Colony Fingerprint-Based Discrimination of Staphylococcus species with Machine Learning Approaches" Sensors, 18, 9 (2018)
  6. Ryo Negishi, Reito Iwata, Tsuyoshi Tanaka, David Kisailus, Yoshiaki Maeda, Tadashi Matsunaga, Tomoko Yoshino "Gel-based cell manipulation method for isolation and genotyping of single-adherent cells" Analyst, 10.1039/C8AN01456F (2018)
  7. Masayoshi Tanaka, Thanawat Suwatthanarak, Atsushi Arakaki, Benjamin R. G. Johnson, Stephen D. Evans, Mina Okochi, Sarah S. Staniland, Tadashi Matsunaga "Enhanced Tubulation of Liposome Containing Cardiolipin by MamY Protein from Magnetotactic Bacteria" Biotechnol. J., e1800087 (2018)
2017
  1. Masaki Muto, Daisuke Nojima, Liang Yue, Hideyuki Kanehara, Hideaki Naruse, Asuka Ujiro, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "Potential of Water Surface-Floating Microalgae for Biodiesel Production: Floating-Biomass and Lipid Productivities" J. Biosci. Bioeng., 123, 314-318 (2017)
  2. Tomoko Yoshino, Tsuyoshi Tanaka, Seita Nakamura, Ryo Negishi, Nozomi Shionoiri, Masahito Hosokawa, Tadashi Matsunaga "Evaluation of Cancer Cell Deformability by Microcavity Array" Anal. Biochem., 520, 16–21 (2017)
  3. Mitsufumi Matsumoto, Daisuke Nojima, Tomomi Nonoyama, Kiichi Ikeda, Yoshiaki Maeda, Tomoko Yoshino, Tsuyoshi Tanaka "Outdoor Cultivation of Marine Diatoms for Year-Round Production of Biofuels" Mar. Drugs, 15, 94 (2017)
  4. Kyoko Osada, Yoshiaki Maeda, Tomoko Yoshino, Daisuke Nojima, Chris Bowler, Tsuyoshi Tanaka "Enhanced NADPH Production in the Pentose Phosphate Pathway Accelerates Lipid Accumulation in the Oleaginous Diatom Fistulifera solaris" Algal Res., 23, 126-134 (2017)
  5. Yoshiaki Maeda, Hironori Dobashi, Yui Sugiyama, Tatsuya Saeki, Tae-kyu Lim, Manabu Harada, Tadashi Matsunaga, Tomoko Yoshino, Tsuyoshi Tanaka "Colony Fingerprint for Discrimination of Microbial Species based on Lensless Imaging of Microcolonies" PLoS One, 12, e0174723 (2017)
  6. Tomoko Yoshino, Kaori Takai, Ryo Negishi, Tatsuya Saeki, Hisashige Kanbara, Yoshihito Kikuhara, Tadashi Matsunaga, Tsuyoshi Tanaka "Rapid Imaging and Detection of Circulating Tumor Cells Using a Wide-Field Fluorescence Imaging System" Anal. Chim. Acta, 969, 1-7 (2017)
  7. Daisuke Nojima, Yuki Ishizuka, Masaki Muto, Asuka Ujiro, Fumito Kodama, Tomoko Yoshino,Yoshiaki Maeda, Tadashi Matsunaga, Tsuyoshi Tanaka "Enhancement of Biomass and Lipid Productivities of Water Surface-Floating Microalgae by Chemical Mutagenesis" Mar. Drugs, 15, 151 (2017)
  8. Atsushi Arakaki, Takuya Matsumoto, Takuma Tateishi, Mitsufumi Matsumoto, Daisuke Nojima, Yoshino Tomoko, Tsuyoshi Tanaka "UV-C Irradiation Accelerates Neutral Lipid Synthesis in the Marine Oleaginous Diatom Fistulifera solaris" Bioresour. Technol., 245, 1520-1526 (2017)
  9. Tomoko Yoshino, Natsumi Kakunaka, Yue Liang, Yasuhito Ito, Yoshiaki Maeda, Tatsuhiro Nomaguchi, Tadashi Matsunaga, Tsuyoshi Tanaka "Production of ω3 Fatty Acids in Marine Cyanobacterium Synechococcus sp. Strain NKBG 15041c via Genetic Engineering" Appl. Microbiol. Biotechnol., 101, 6899–6905 (2017)
  10. Tsuyoshi Tanaka, Takashi Yabuuchi, Yoshiaki Maeda, Daisuke Nojima, Mitsufumi Matsumoto, Tomoko Yoshino "Production of Eicosapentaenoic Acid by High Cell Density Cultivation of the Marine Oleaginous Diatom Fistulifera solaris" Bioresour. Technol., 245, 567-572 (2017)
2016
  1. Yoshiaki Maeda, Takahiro Toyoda, Takeyuki Mogi, Tomoyuki Taguchi, Takeo Tanaami, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "DNA Recovery from a Single Bacterial Cell Using Charge-reversible Magnetic Nanoparticles" Colloids Surf. B: Biointerfaces., 139, 117-122 (2016)
  2. Yoshiaki Maeda, Takuma Tateishi, Yuta Niwa, Masaki Muto, Tomoko Yoshino, David Kisailus, Tsuyoshi Tanaka "Peptide-mediated Microalgae Harvesting Method for Efficient Biofuel Production" Biotechnol. Biofuels, 9 (2016)
  3. Tomoko Yoshino, Tsuyoshi Tanaka, Seita Nakamura, Ryo Negishi, Masahito Hosokawa, Tadashi Matsunaga "Manipulation of a Single Circulating Tumor Cell Using Visualization of Hydrogel Encapsulation toward Single-Cell Whole-Genome Amplification" Anal. Chem., 88, 7230-7237 (2016)
2015
  1. Yoshihiko Sunaga, Yoshiaki Maeda, Takashi Yabuuchi, Masaki Muto, Tomoko Yoshino, Tsuyoshi Tanaka "Chloroplast-Targeting Protein Expression in the Oleaginous Diatom Fistulifera solaris JPCC DA0580 toward Metabolic Engineering" J. Biosci. Bioeng., 119, 28-34 (2015)
  2. Tomoko Yoshino, Yue Liang, Daichi Arai, Yoshiaki Maeda, Toru Honda, Masaki Muto, Natsumi Kakunaka, Tsuyoshi Tanaka "Alkane Production by the Marine Cyanobacterium Synechococcus sp. NKBG15041c Possessing the α-olefin Biosynthesis Pathway" Appl. Microbiol. Biotechnol., 99, 1521-1529 (2015)
  3. Masaki Muto, Masayoshi Tanaka, Yue Liang, Tomoko Yoshino, Mitsufumi Matsumoto, Tsuyoshi Tanaka "Enhancement of Glycerol Metabolism in the Oleaginous Marine Diatom Fistulifera solaris JPCC DA0580 to Improve Triacylglycerol Productivity" Biotechnol. Biofuels, 8 (2015)
  4. Tatsuya Saeki, Yuriko Sugamura, Masahito Hosokawa, Tomoko Yoshino, Tae-kyu Lim, Manabu Harada, Tadashi Matsunaga, Tsuyoshi Tanaka "Simple and Rapid CD4 Testing Based on Large-field Imaging System Composed of Microcavity Array and Two-dimensional Photosensor" Biosens. Bioelectron., 67, 350-355 (2015)
  5. Ryo Negishi, Masahito Hosokawa, Seita Nakamura, Hisashige Kanbara, Masafumi Kanetomo, Yoshihito Kikuhara, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "Development of the Automated Circulating Tumor Cell Recovery System with Microcavity Array" Biosens. Bioelectron., 67, 438-442 (2015)
  6. Toru Honda, Takayuki Yasuda, Tsuyoshi Tanaka, Koji Hagiwara, Tohru Arai, Tomoko Yoshino "Functional Expression of Full-Length TrkA in the Prokaryotic Host Magnetospirillum magneticum AMB-1 by Using a Magnetosome Display System" Appl. Environ. Microbiol., 81, 1472-1476 (2015)
  7. Toru Honda, Yoshiaki Maeda, Takayuki Yasuda, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "Novel Designs of Single-chain MHC I/peptide Complex for the Magnetosome Display System" Protein Eng. Des. Sel., 28, 53-58 (2015)
  8. Tsuyoshi Tanaka, Yoshiaki Maeda, Alaguraj Veluchamy, Michihiro Tanaka, Heni Abida, Eric Maréchal, Chris Bowler, Masaki Muto, Yoshihiko Sunaga, Masayoshi Tanaka, Tomoko Yoshino, Takeaki Taniguchi, Yorikane Fukuda, Michiko Nemoto, Mitsufumi Matsumoto, Pui Shan Wong, Sachiyo Aburatani, Wataru Fujibuchi "Oil Accumulation by the Oleaginous Diatom Fistulifera solaris as Revealed by the Genome and Transcriptome" Plant Cell, 27, 162-176 (2015)
  9. Yue Liang, Kyoko Osada, Yoshihiko Sunaga, Tomoko Yoshino, Chris Bowler, Tsuyoshi Tanaka "Dynamic Oil Body Generation in the Marine Oleaginous Diatom Fistulifera solaris in Response to Nutrient Limitation as Revealed by Morphological and Lipidomic Analysis" Algal Res., 12, 359-367 (2015)
  10. Toru Honda, Tsuyoshi Tanaka, Tomoko Yoshino "Stoichiometrically Controlled Immobilization of Multiple Enzymes on Magnetic Nanoparticles by the Magnetosome Display System for Efficient Cellulose Hydrolysis" Biomacromolecules, 16, 3863-3868 (2015)
2014
  1. Reiko Sato, Yoshiaki Maeda, Tomoko Yoshino and Tsuyoshi Tanaka, Mitsufumi Matsumoto "Seasonal Variation of Biomass and Oil Production of the Oleaginous Diatom Fistulifera sp. in Outdoor Vertical Bubble Column and Raceway-type Bioreactors" J. Biosci. Bioeng., 117, 720-724 (2014)
  2. Yue Liang, Yoshiaki Maeda, Tomoko Yoshino, Mitsufumi Matsumoto, Tsuyoshi Tanaka "Profiling of Fatty Acid Methyl Esters from the Oleaginous Diatom Fistulifera sp. Strain JPCC DA0580 under Nutrition-Sufficient and-Deficient Conditions" J. Appl. Phycol., 26, 2295-2302 (2014)
  3. Kyoko Osada, Masahito Hosokawa, Tomoko Yoshino and Tsuyoshi Tanaka "Monitoring of Cellular Behaviors by Microcavity Array-Based Single-Cell Patterning" Analyst, 139. 425-430 (2014)
  4. Yasuhiro Sugamata, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "Functional Expression of an scFv on Bacterial Magnetic particles by In Vitro Docking" Biochem. Biophy. Res. Commun., 445. 1-5 (2014)
  5. Tatsuya Saeki, Masahito Hosokawa, Tae-kyu Lim, Manabu Harada, Tadashi Matsunaga, Tsuyoshi Tanaka "Digital Cell Counting Device Integrated with a Single-Cell Array" PLoS One, 9. e89011 (2014)
  6. Yue Liang, Yoshiaki Maeda, Tomoko Yoshino, Mitsufumi Matsumoto, Tsuyoshi Tanaka "Profiling of Polar Lipids in Marine Oleaginous Diatom Fistulifera solaris JPCC DA0580: Prediction of the Potential Mechanism for Eicosapentaenoic Acid-incorporation into Triacylglycerol" Mar. Drugs, 12, 3218-3230 (2014)
  7. Yoshiaki Maeda, Yoshihiko Sunaga, Tomoko Yoshino, Tsuyoshi Tanaka "Oleosome-Associated Protein of the Oleaginous Diatom Fistulifera solaris Contains an Endoplasmic Reticulum-Targeting Signal Sequence" Mar. Drugs, 12.7, 3892-3903 (2014)
  8. Toru Honda, Yue Liang, Daichi Arai, Yasuhito Ito, Tomoko Yoshino, Tsuyoshi Tanaka "Draft Genome Sequence of Marine Cyanobacterium Synechococcussp. Strain NKBG042902, the Strain Harboring a Homogeneous Plasmid Available for Metabolic Engineering" Genome Announc., 2, e00704-14 (2014)
  9. Michiko Nemoto, Yoshiaki Maeda, Masaki Muto, Masayoshi Tanaka, Tomoko Yoshino Shigeki Mayama, Tsuyoshi Tanaka "Identification of a Frustule-Associated Protein of the Marine Pennate Diatom Fistulifera sp. strain JPCC DA0580" Mar. Genomics, 6, 39-44 (2014)
  10. Masahito Hosokawa, Masahiro Ando, Shoichiro Mukai, Kyoko Osada, Tomoko Yoshino, Hiro-o Hamaguchi, Tsuyoshi Tanaka "In Vivo Live Cell Imaging for the Quantitative Monitoring of Lipids by Using Raman Microspectroscopy" Anal. Chem., 86.16, 8224-8230 (2014)
  11. Mitsufumi Matsumoto, Shigeki Mayama, Michiko Nemoto, Yorikane Fukuda, Masaki Muto, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "Morphological and Molecular Phylogenetic Analysis of the High-triglyceride Producing Marine Diatom, Fistulifera solaris sp. nov. (Bacillariophyceae)" Phycol. Res., 62, 257-268 (2014)
  12. Yoshiaki Maeda, Yasuhito Ito, Toru Honda, Tomoko Yoshino, Tsuyoshi Tanaka "Inducible Expression System for the Marine Cyanobacterium Synechococcussp. Strain NKBG 15041c" Int. J. Hydrogen Energy, 39, 19382-19388 (2014)
  13. Pui Shan Wong, Michihiro Tanaka, Yoshihiko Sunaga, Masayoshi Tanaka, Takeaki Taniguchi, Tomoko Yoshino, Tsuyoshi Tanaka, Wataru Fujibuchi, Sachiyo Aburatani "Tracking Difference in Gene Expression in a Time-course Experiment Using Gene Set Enrichment Analysis" PLoS One, 9, e107629 (2014)
2013
  1. Yasuhiro Sugamata, Ryo Uchiyama, Toru Honda, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "Functional Expression of Thyroid-Stimulating Hormone Receptor on Nano-Sized Bacterial Magnetic Particles in Magnetospirillum magneticum AMB-1" Int. J. Mol. Sci., 14. 14426-14438 (2013)
  2. Tomoko Yoshino, Toru Honda, Masayoshi Tanaka, Tsuyoshi Tanaka "Draft Genome Sequence of Marine Cyanobacterium Synechococcus sp. Strain NKBG15041c" Genome Announc., 1. e00954-13 (2013)
  3. Masaki Muto, Chihiro Kubota, Masayoshi Tanaka, Akira Satoh, Mitsufumi Matsumoto, Tomoko Yoshino, Tsuyoshi Tanaka "Identification and Functional Analysis of Delta-9 Desaturase, a Key Enzyme in PUFA Synthesis, Isolated from the Oleaginous Diatom Fistulifera" PLoS One, 8. e73507 (2013)
  4. Daisuke Nojima, Tomoko Yoshino, Yoshiaki Maeda, Masayoshi Tanaka, Michiko Nemoto, Tsuyoshi Tanaka "Proteomics Analysis of Oil Body-Associated Proteins in the Oleaginous Diatom" J. Proteome Res., 12. 5293–5301 (2013)
  5. Masahito Hosokawa, Hirotsugu Kenmotsu, Yasuhiro Koh, Tomoko Yoshino, Takayuki Yoshikawa, Tateaki Naito, Toshiaki Takahashi, Haruyasu Murakami, Yukiko Nakamura, Asuka Tsuya, Takehito Shukuya, Akira Ono, Hiroaki Akamatsu, Reiko Watanabe, Sachiyo Ono, Keita Mori, Hisashige Kanbara, Ken Yamaguchi, Tsuyoshi Tanaka, Tadashi Matsunaga, Nobuyuki Yamamoto "Size-Based Isolation of Circulating Tumor Cells in Lung Cancer Patients Using a Microcavity Array System" PLoS One, 8. e67466 (2013)
  6. Masahito Hosokawa, Takayuki Yoshikawa, Ryo Negishi, Tomoko Yoshino, Yasuhiro Koh, Hirotsugu Kenmotsu, Tateaki Naito, Toshiaki Takahashi, Nobuyuki Yamamoto, Yoshihito Kikuhara, Hisashige Kanbara, Tsuyoshi Tanaka, Ken Yamaguchi, Tadashi Matsunaga "Microcavity Array System for Size-Based Enrichment of Circulating Tumor Cells from the Blood of Patients with Small-Cell Lung Cancer" Anal. Chem., 85. 5692-5698 (2013)
  7. Akira Satoh, Kyonosuke Ichii, Mitsufumi Matsumoto, Chihiro Kubota, Michiko Nemoto, Masayoshi Tanaka, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "A Process Design and Productivity Evaluation for Oil Production by Indoor Mass Cultivation of a Marine Diatom, Fistulifera sp. JPCC DA0580" Bioresour Technol., 137. 132-138 (2013)
  8. Yuka Kanetsuki, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "Enhanced Heterologous Protein Display on Bacterial Magnetic Particles Using a Lon Protease Deletion Mutant in Magnetospirillum magneticum AMB-1" J. Biosci. Bioeng., 116. 65-70 (2013)
  9. Masaki Muto, Yorikane Fukuda, Michiko Nemoto, Tomoko Yoshino, Tadashi Matsunaga, Tsuyoshi Tanaka "Establishment of a Genetic Transformation System for the Marine Pennate Diatom Fistulifera sp. Strain JPCC DA0580 - a High Triglyceride Producer" Mar. Biotechnol., 15. 48-55 (2013)
  10. Masahito Hosokawa, Marie Asami, Tomoko Yoshino, Noriyuki Tsujimura, Masayuki Takahashi, Satoshi Nakasono, Tsuyoshi Tanaka, Tadashi Matsunaga "Monitoring of Benzene-induced Hematotoxicity in Mice by Serial Leukocyte Counting Using a Microcavity Array" Biosens. Bioelectron., 40. 110-114 (2013)
  11. Yue Liang, Yoshiaki Maeda, Yoshihiko Sunaga, Masaki Muto, Mitsufumi Matsumoto, Tomoko Yoshino, Tsuyoshi Tanaka "Biosynthesis of Polyunsaturated Fatty Acids in the Oleaginous Marine Diatom Fistulifera sp. Strain JPCC DA0580" Mar. Drugs, 11.12, 5008-5023 (2013)
2012
  1. Masayuki Takahashi, Noriyuki Tsujimura, Tomoko Yoshino, Masahito Hosokawa, Kensuke Otsuka, Tadashi Matsunaga, Satoshi Nakasono "Assessment of Benzene-Induced Hematotoxicity Using a Human-Like Hematopoietic Lineage in NOD/Shi-scid/IL-2RγNull Mice" PLoS One, 7. e50448 (2012)
  2. Yuka Kanetsuki, Masayoshi Tanaka, Tsuyoshi Tanaka, Tadashi Matsunaga, Tomoko Yoshino "Effective Expression of Human Proteins on Bacterial Magneticparticles in an Anchor Gene Deletion Mutant of Magnetospirillum magneticum AMB-1" Biochem. Biophys. Res. Commun., 426. 7-11 (2012)
  3. Masahito Hosokawa, Marie Asami, Seita Nakamura, Tomoko Yoshino, Noriyuki Tsujimura, Masayuki Takahashi, Satoshi Nakasono, Tsuyoshi Tanaka, Tadashi Matsunaga "Leukocyte Counting from a Small Amount of Whole Blood Using a Size-Controlled Microcavity Array" Biotechnol. Bioeng., 109. 2017-2024 (2012)
  4. Masayuki Takahashi, Noriyuki Tsujimura, Kensuke Otsuka, Tomoko Yoshino, Tetsushi Mori, Tadashi Matsunaga, Satoshi Nakasono "Comprehensive Evaluation of Leukocyte Lineage Derived from Human Hematopoietic Cells in Humanized Mice" J. Biosci. Bioeng., 113. 529-535 (2012)
2011
  1. Masahito Hosokawa, Takuma Hayashi, Tetsushi Mori, Tomoko Yoshino, Satoshi Nakasono, Tadashi Matsunaga "Microfluidic Device with Chemical Gradient for Single-Cell Cytotoxicity Assays" Anal. Chem., 83. 3648-3654 (2011)
  2. Tsuyoshi Tanaka, Yorikane Fukuda, Tomoko Yoshino, Yoshiaki Maeda, Masaki Muto, Mitsufumi Matsumoto, Shigeki Mayama, Tadashi Matsunaga "High-Throughput Pyrosequencing of the Chloroplast Genome of a Highly Neutral-Lipid-Producing Marine Pennate Diatom, Fistulifera sp. Strain JPCC DA0580" Photosynth. Res., 109. 223-229 (2011)
2010
  1. Masahito Hosokawa, Taishi Hayata, Yorikane Fukuda, Atsushi Arakaki, Tomoko Yoshino, Tsuyoshi Tanaka, Tadashi Matsunaga "Size-Selective Microcavity Array for Rapid and Efficient Detection of Circulating Tumor Cells" Anal. Chem., 82. 6629-6635 (2010)
  2. Yoshiaki Maeda, Tomoko Yoshino, Tadashi Matsunaga "In Vivo Biotinylation of Bacterial Magnetic Particles by Truncated form of Escherichia coli Biotin Ligase and Biotin Acceptor Peptide" Appl. Environ. Microbiol., 76. 5785-5790 (2010)
  3. Masayuki Takahashi, Tomoko Yoshino, Tadashi Matsunaga "Surface modification of magnetic nanoparticles using asparagines-serine polypeptide designed to control interactions with cell surfaces" Biomaterials, 31. 4952-4957 (2010)
  4. Tomoko Yoshino, Akiko Shimojo, Yoshiaki Maeda, Tadashi Matsunaga "Inducible Expression of Transmembrane Proteins on Bacterial Magnetic Particles in Magnetospirillum magneticum AMB-1" Appl. Environ. Microbiol., 76. 1152-1157 (2010)
2009
  1. Yoshiaki Maeda, Tomoko Yoshino, Tadashi Matsunaga "Novel Nanocomposites Consisting of In Vivo-Biotinylated Bacterial Magnetic Particles and Quantum Dots for Magnetic Separation and Fluorescent Labeling of Cancer Cells"J. Mater. Chem., 19, 6361-6366 (2009)
  2. Motoki Kuhara, Tomoko Yoshino, Miho Shiokawa, Tomoya Okabe, Shinji Mizoguchi, Akihiko Yabuhara, Haruko Takeyama, Tadashi Matsunaga "Magnetic Separation of Human Podocalyxin-Llike Protein 1 (hPCLP1)-Positive Cells from Peripheral Blood Using Anti-hPCLP1 Monoclonal Antibody and Protein a Expressed on Bacterial Magnetic Particles"Cell Struct. Funct., 34, 23-30 (2009)
  3. Tetsushi Mori, Mai Murata, Tomoko Yoshino, Satoshi Nakasono, Fumiyo Saito, Haruko Takeyama, Tadashi Matsunaga "A Stable Human Progesterone Receptor Expressing HeLa Reporter Cell Line as a Tool in Chemical Evaluation at Different Cell-Cycle Phases" Toxicol. Lett., 186, 123-129 (2009)
  4. Tomoko Yoshino, Taisei Nishimura, Tetsushi Mori, Shigeya Suzuki, Hideki Kambara, Haruko Takeyama, Tadashi Matsunaga "Nano-Sized Bacterial Magnetic Particles Displaying Pyruvate Phosphate Dikinase for Pyrosequencing" Biotechnol. Bioeng., 103, 130-137 (2009)
  5. Masayuki Takahashi, Yasuto Akiyama, Junpei Ikezumi, Takeshi Nagata, Tomoko Yoshino, Akira Iizuka, Ken Yamaguchi, Tadashi Matsunaga "Magnetic Separation of Melanoma-specific Cytotoxic T Lymphocytes from a Vaccinated Melanoma Patient’s Blood Using MHC/Peptide Complex-conjugated Bacterial Magnetic Particles" Bioconjugate Chem., 20, 304-309 (2009)
  6. Masayuki Takahashi, Tomoko Yoshino, Haruko Takeyama, Tadashi Matsunaga "Direct Magnetic Separation of Immune Cells from Whole Blood Using Bacterial Magnetic Particles Displaying Protein G" Biotechnol. Prog., 25, 219-226 (2009)
2008
  1. Tomoko Yoshino, Hisashi Hirabe, Masayuki Takahashi, Motoki Kuhara, Haruko Takeyama, Tadashi Matsunaga "Magnetic Cell Separation Using Nano-Sized Bacterial Magnetic Particles with Reconstructed Magnetosome Membrane" Biotechnol. Bioeng., 101, 470-477 (2008)
  2. Tomoko Yoshino, Chihiro Kaji, Makoto Nakai, Fumiyo Saito, Haruko Takeyama, Tadashi Matsunaga "Novel Method for Evaluation of Chemicals Based on Ligand-Dependent Recruitment of GFP Labeled Coactivator to Estrogen Receptor Displayed on Bacterial Magnetic Particles" Anal. Chim. Acta, 626, 71-77 (2008)
  3. Yoshiaki Maeda, Tomoko Yoshino, Masaaki Takahashi, Harumi Ginya, Junko Asahina, Hideji Tajima, Tadashi Matsunaga "Noncovalent Immobilization of Streptavidin on In Vitro- and In Vivo-Biotinylated Bacterial Magnetic Particles" Appl. Environ. Microbiol., 74, 5139-5145 (2008)
  4. Tetsushi Mori, Fumiyo Saito, Tomoko Yoshino, Haruko Takeyama, Tadashi Matsunaga "Reporter Gene Assay against Lipophilic Chemicals Based on Site- Specific Genomic Recombination of a Nuclear Receptor Gene, Its Response Element, and a Luciferase Reporter Gene within a Stable HeLa Cell Line" Biotechnol. Bioeng., 99, 1453-1461 (2008)
2007
  1. Tadashi Matsunaga, Yoshiaki Maeda, Tomoko Yoshino, Haruko Takeyama, Masaaki Takahashi, Harumi Ginya, Junko Asahina, Hideji Tajima "Fully Automated Immunoassay for Detection of Prostate-Specific Antigen Using Nano-Magnetic Beads and Micro-Polystyrene Bead Composites, ‘Beads on Beads’" Anal. Chim. Acta, 597, 331-339 (2007)
  2. Takeyuki Suzuki, Yoshiko Okamura, Atsushi Arakaki, Haruko Takeyama, Tadashi Matsunaga "Cytoplasmic ATPase Involved in Ferrous Ion Uptake from Magnetotactic Bacterium Magnetospirillum magneticum AMB-1" FEBS Lett., 581, 3443-3448 (2007)
2006
  1. Tadashi Matsunaga, Masayuki Takahashi, Tomoko Yoshino, Motoki Kuhara, Haruko Takeyama "Magnetic Separation of CD14+ Cells Using Antibody Binding with Protein A Expressed on Bacterial Magnetic Particles for Generating Dendritic Cells" Biochem. Biophys. Res. Commun., 350, 1019-1025 (2006)
  2. Hiroyuki Ota, Tae-Kyu Lim, Tsuyoshi Tanaka, Tomoko Yoshino, Manabu Harada, Tadashi Matsunaga "Automated DNA Extraction from Genetically Modified Maize Using Aminosilane-modified Bacterial Magnetic Particles" J. Biotechnol., 125, 361-368 (2006)
  3. Tomoko Yoshino, Tadashi Matsunaga "Efficient and Stable Display of Functional Proteins on Bacterial Magnetic Particles Using Mms13 as a Novel Anchor Molecule" Appl. Environ. Microbiol., 72, 465-471 (2006)
2005
  1. Tomoko Yoshino, Tadashi Matsunaga "Development of Efficient Expression System for Protein Display on Bacterial Magnetic Particles" Biochem. Biophys. Res. Commun., 338, 1678-1681 (2005)
  2. Tomoko Yoshino, Fukuichi Kato, Haruko Takeyama, Makoto Nakai, Yoshikuni Yakabe, Tadashi Matsunaga "Development of a Novel Method for Screening of Estrogenic Compounds Using Nano-Sized Bacterial Magnetic Particles Displaying Estrogen Receptor" Anal. Chim. Acta, 532, 105-111 (2005)
  3. Ipsita A. Banerjee, Lingtao Yu, Mutsuhiro Shima, Tomoko Yoshino, Haruko Takeyama, Tadashi Matsunaga, Hiroshi Matsui "Magnetic Nanotube Fabrication by Using Magnetic Bacteria" Advanced Materials, 17(9), 1128-1131 (2005)