池袋一典 研究室　最近の主な論文

||最新-2016年|| ||2015年-2011年|| ||2010年-2006年|| ||2005年-2001年||

2015年

  1. Inhibition of an Allergen-Antibody Reaction Related to Japanese Cedar Pollinosis Using DNA Aptamers Against the Cry j 2 Allergen
    Kazumasa Ogihara, Nasa Savory, Koichi Abe, Wataru Yoshida, Mitsuru Arakawa, Masahiko Asahi, Seika Kamohara and Kazunori Ikebukuro
    Nucleic Acid Therapeutics (2015), 25 (6), 311-316



  2. アプタマーを用いた機能性電極
    Jinhee Lee and Kazunori Ikebukuro
    Electrochemistry (2015), 83-12, 1085-1090



  3. Identification of RNA Oligonucleotides Binding to Several Proteins from Potential G-Quadruplex Forming Regions in Transcribed Pre-mRNA
    Taiki Saito†, Wataru Yoshida†, Tomomi Yokoyama, Koichi Abe and Kazunori Ikebukuro
    Molecules (2015). 20 (11), 20832–20840

    4. †: 筆頭著者



  4. DNA Detection Technology Using Zinc Finger Protein
    Takenori Kumagai, Koichi Abe, Wataru Yoshida and Kuzunori Ikebukuro
    Journal of Microbial & Biochemical Technology (2015). 7:5, 278-281



  5. Improvement of the VEGF binding ability of DNA aptamers through in silico maturation and multimerization strategy
    Takahiro Fukaya†, Koichi Abe†, Nasa Savory, Kaori Tsukakoshi, Wataru Yoshida, Stefano Ferri, Koji Sode, and Kazunori Ikebukuro
    Journal of Biotechnology (2015). 212, 99–105

    6. †: 筆頭著者



  6. Enzyme linking to DNA aptamers via a zinc finger as a bridge
    Koichi Abe, Yoshiyuki Murakami, Atsuro Tatsumi, Koichi Sumida, Aki Kezuka, Takahiro Fukaya, Takenori Kumagai, Yuko Osawa, Koji Sode and Kazunori Ikebukuro
    Chemical Communications (2015). 51 (57 ), 11467-11469



  7. Development of an automated direct blotting electrophoresis system for bioanalytical applications
    Shinichi Goto, Nasa Savory, Koichi Abe, Hideki Kinoshita and Kazunori Ikebukuro
    Analytical Methods (2015). 7, 4881-4884



  8. Scaffold-fused riboregulators for enhanced gene activation in Synechocystis sp. PCC 6803
    Yuta Sakai, Koichi Abe, Saki Nakashima, James J. Ellinger, Stefano Ferri, Koji Sode and Kazunori Ikebukuro
    MicrobiologyOpen (2015). 4(4), 533-540




2014年

  1. Chapter 11: In silico Maturation: Processing Sequences to Improve Biopolymer Functions Based on Genetic Algorithms
    Nasa Savory, Koichi Abe, Wataru Yoshida, Kazunori Ikebukuro
    Applications of Metaheuristics in Process Engineering Springer International Publishing, Switzerland (2014) pp 271-288



  2. DNA aptamers against the Cry j 2 allergen of Japanese cedar pollen for biosensing applications
    Kazumasa Ogihara, Nasa Savory, Koichi Abe, Wataru Yoshida, Masahiko Asahi, Seika Kamohara, and Kazunori Ikebukuro
    Biosensors and Bioelectronics (2015). 63, 159-165



  3. Selection of DNA aptamers against uropathogenic Escherichia coli NSM59 by quantitative PCR controlled Cell-SELEX
    Nasa Savory, Jonathan Nzakizwanayo, Koichi Abe, Wataru Yoshida, Stefano Ferri, Cinzia Dedi, Brian V. Jones, and Kazunori Ikebukuro
    Journal of Microbiological Methods (2014) 104, 94-100



  4. Electrochemical detection of pathogenic bacteria by using a glucose dehydrogenase fused zinc finger protein
    Jinhee Lee, Atsuro Tatsumi, Koichi Abe, Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Analytical Methods (2014) 6, 4991-4994



  5. Simultaneous improvement of specificity and affinity of aptamers against Streptococcus mutans
    by in silico maturation for biosensor development
    Nasa Savory†, Yayoi Takahashi†, Kaori Tsukakoshi, Hijiri Hasegawa, Madoka Takase, Koichi Abe, Wataru Yoshida, Stefano Ferri, Shizuko Kumazawa, Koji Sode and Kazunori Ikebukuro
    Biotechnology and Bioengineering. (2014). 111 (3), 454-461

    6. †: 筆頭著者

  6. Vascular Endothelial Growth Factor (VEGF) Detection Using an Aptamer and PNA-Based Bound/Free Separation System
    Chifuku Mita†, Koichi Abe†, Takahiro Fukaya and Kazunori Ikebukuro
    Materials. (2014). 7 (2), 1046-1054

    7. †: 筆頭著者


  7. Improving the Gene-Regulation Ability of Small RNAs by Scaffold Engineering in Escherichia coli
    Yuta Sakai, Koichi Abe, Saki Nakashima,Wataru Yoshida, Stefano Ferri,Koji Sode and Kazunori Ikebukuro
    ACS Synth. Biol. 3 (3) 152-162 (2014)



  8. Design of riboregulators for control of cyanobacterial (Synechocystis) protein expression
    Koichi Abe, Yuta Sakai, Saki Nakashima, Masataka Araki, Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Biotechnology Letters. (2014). 36 (2), 287-294



  9. The development of an autonomous self-powered bio-sensing actuator
    Takuya Hanashi, Tomohiko Yamazaki, Hiroshi Tanaka, Kazunori Ikebukuro, Wakako Tsugawa and Koji Sode
    Sensors and Actuators B: Chemical (2014). 196 (2), 429-433



  10. Emerging techniques employed in aptamer-based diagnostic tests
    Wataru Yoshida, Koichi Abe and Kazunori Ikebukuro
    Expert Review of Molecular Diagnostics (2014). 14 (2), 143-151



  11. Electrochemical Biosensors Using Aptamers for Theranostics
    Koichi Abe, Wataru Yoshida and Kazunori Ikebukuro
    Biosensors Based on Aptamers and Enzymes (2014). 140, 183-202



  12. A green-light inducible lytic system for cyanobacterial cells
    Kotone Miyake, Koichi Abe, Stefano Ferri, Mitsuharu Nakajima, Mayumi Nakamura, Wataru Yoshida, Katsuhiro Kojima, Kazunori Ikebukuro and Koji Sode
    Biotechnology For Biofuels (2014). 7, 56



  13. Engineering of a green-light inducible gene expression system in Synechocystis sp PCC6803
    Koichi Abe, Kotone Miyake, Mayumi Nakamura, Katsuhiro Kojima, Stefano Ferri, Kazunori Ikebukuro and Koji Sode
    Microbial Biotechnology (2014). 7 (2), 177-183




2013年

  1. Two-Dimensional Electrophoresis-Based Selection of Aptamers Against an Unidentified Protein in a Tissue Sample
    Nasa Savory, Shinichi Goto, Wataru Yoshida, Yutaka Unuma, Makoto Nakamura, Koichi Abe, Stefano Ferri, Kazunori Ikebukuro
    Analytical Letters. (2013). 46 (18), 2954-2963



  2. Screening of Peptide Ligands for Pyrroloquinoline Quinone Glucose Dehydrogenase Using Antagonistic Template-Based Biopanning
    Koichi Abe, Wataru Yoshida, Kotaro Terada, Yukiko Yagi-Ishii, Stefano Ferri, Kazunori Ikebukuro, Koji Sode
    International journal of molecular sciences. (2013). 14 (12), 23244-23256



  3. Fluorescent-Ligand-Mediated Screening of G-Quadruplex Structures Using a DNA Microarray
    Keisuke Iida†, Takahiro Nakamura†, Wataru Yoshida†, Masayuki Tera, Kazuhiko Nakabayashi, Kenichiro Hata, Kazunori Ikebukuro, Dr. Kazuo Nagasawa
    Angew Chem Int Ed Engl. (2013) Epub ahead of print. doi: 10.1002/anie.201305366

    4. †: 筆頭著者



  4. Aptamer selection based on g4-forming promoter region
    Wataru Yoshida, Taiki Saito, Tomomi Yokoyama, Stefano Ferri, Kazunori Ikebukuro
    PLoS One. 2013;8(6):e65497.



  5. Automatic polymerase chain reaction product detection system for food safety monitoring using zinc finger protein fused to luciferase
    Wataru Yoshida, Aki Kezuka, Yoshiyuki Murakami, Jinhee Lee, Koichi Abe, Hiroaki Motoki, Takafumi Matsuo, Nobuaki Shimura, Mamoru Noda, Shizunobu Igimi, Kazunori Ikebukuro
    Analytica Chimica Acta (2013) 801, 78-83



  6. In silico maturation of binding‐specificity of DNA aptamers against Proteus mirabilis
    Nasa Savory, Danielle Lednor, Kaori Tsukakoshi, Koichi Abe, Wataru Yoshida, Stefano Ferri, Brian V Jones, Kazunori Ikebukuro
    Biotechnology and Bioengineering (2013). 110 (10), 2573-2580



  7. Detection of histone modification by chromatin immunoprecipitation combined zinc finger luciferase-based bioluminescence resonance energy transfer assay
    Wataru Yoshida, Aki Kezuka, Koich Abe, Hironobu Wakeda, Kazuhiko Nakabayashi, Kenichiro Hata, Kazunori Ikebukuro
    Analytical Chemistry 85 (13), 6485-6490



  8. Affinity improvement of a VEGF aptamer by in silico maturation for a sensitive VEGF-detection system
    Yoshihiko Nonaka, Wataru Yoshida, Koichi Abe, Stefano Ferri, Holger Schulze, Till T. Bachmann, Kazunori Ikebukuro
    Analytical Chemistry (2013). 85(2):1132-7



  9. An Optical Biosensing System Based on Interference-Enhanced Reflection with Aptameric Enzyme Subunits of Thrombin
    Wataru Yoshida and Kazunori Ikebukuro
    Analytical Letters (2013). 46(2), 242-249



  10. Rapid cytotoxicity screening platform for amyloid inhibitors using a membrane-potential sensitive fluorescent probe
    Jihoon Kim, Yasuhiko Sasak, Wataru Yoshida, Natsuki Kobayashi, Anthony J. Veloso, Kagan Kerman, Kazunori Ikebukuro and Koji Sode
    Analytical Chemistry (2013). 85(1), 185-192




2012年

  1. BioLC-Oscillator: A self-powered wireless glucose-sensing system with the glucose dependent resonance frequency
    Takuya Hanashi, Tomohiko Yamazaki, Wakako Tsugawa, Kazunori Ikebukuro and Koji Sode
    Electrochemistry (2012). 80 (5), 367–370



  2. Detection of pathogenic bacteria by using zinc finger protein fused with firefly luciferase
    Koichi Abe†, Takenori Kumagai†, Chiaki Takahashi, Aki Kezuka, Yoshiyuki Murakami, Yuko Osawa, Hiroaki Motoki, Takafumi Matsuo, Michio Horiuchi, Koji Sode, Shizunobu Igimi and Kazunori Ikebukuro
    Analytical Chemistry (2012). 84 (18), 8028–8032

    3. †: 筆頭著者



  3. Development of a method to measure DNA methylation levels by using methyl CpG-binding protein and luciferase-fused zinc finger protein
    Daisuke Hiraoka, Wataru Yoshida, Koichi Abe, Hironobu Wakeda, Kenichiro Hata, Kazunori Ikebukuro
    Analytical Chemistry (2012). 84(19):8259-64



  4. Electrochemical detection of Vascular Endothelial Growth Factor by an aptamer-based bound/free separation system
    Koichi Abe, Hijiri Hasegawa and Kazunori Ikebukuro
    Electrochemistry (2012). 80 (5), 348–352



  5. Electrochemical detection of Vascular Endothelial Growth Factor with aptamer sandwich
    Yoshihiko Nonaka, Koichi Abe and Kazunori Ikebukuro
    Electrochemistry (2012). 80 (5), 363–366



  6. Electrochemical SNP detection using glucose dehydrogenase
    Koichi Abe, Chiharu Kiyohara, Yoko Saito, Koji Sode and Kazunori Ikebukuro
    Electrochemistry (2012). 80 (5), 345–347



  7. Selection of DNA aptamers that recognize α-synuclein oligomers using a competitive screening method
    Kaori Tsukakoshi, Koichi Abe, Koji Sode, Kazunori Ikebukuro
    Analytical Chemistry (2012). 84 (13), 5542-5547




2011年

  1. Analysis of the unbinding force between telomestatin derivatives and human telomeric G-quadruplex by atomic force microscopy
    Yosuke Amemiya, Yui Furunaga, Keisuke Iida, Masayuki Tera, Kazuo Nagasawa, Kazunori Ikebukuro and Chikashi Nakamura
    Chemical Communications (2011). 47 (26), 7485-7487



  2. Aptameric sensors based on structural change for diagnosis
    Koichi Abe, Daisuke Ogasawara, Wataru Yoshida, Koji Sode and Kazunori Ikebukuro
    Faraday Discussions (2011). 149, 93-106



  3. Development of a novel biosensing system based on the structural change of a polymerized guanine-quadruplex DNA nanostructure
    Yo Morita, Wataru Yoshida, Nasa Savory, Sung Woong Han, Masayuki Tera, Kazuo Nagasawa, Chikashi Nakamura, Koji Sode and Kazunori Ikebukuro
    Biosensors and Bioelectronics (2011). 26, 4837–4841



  4. Non-label homogeneous protein detection based on laser interferometric photo-thermal displacement measurement using aptamers
    Kaori Tsukakoshi, Daisuke Ogasawara, Eiji Takahashi, Ryo Katayama and Kazunori Ikebukuro
    Biotechnology Journal (2011). 6, 101–106


||最新-2016年|| ||2015年-2011年|| ||2010年-2006年|| ||2005年-2001年||
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